Transcript: ENST00000372994.1 C9orf16-001

Description

chromosome 9 open reading frame 16 [Source:HGNC Symbol;Acc:17823]

Gene Synonyms

EST00098, FLJ12823, MGC4639

Location

About this transcript

This transcript has 2 exons, is annotated with 3 domains and features, is associated with 1703 variant alleles and maps to 346 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000372994.1	C9orf16-001	713	83aa	ENSP00000362085.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6893	Q9BUW7	NM_024112.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000492588.1	C9orf16-002	1570	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489240.1	C9orf16-004	573	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000486420.1	C9orf16-003	434	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 713 bps, Translation length: 83 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BUW7

CCDS

This transcript is a member of the Human CCDS set: CCDS6893

Version

ENST00000372994.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000054351 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.