Transcript: ENST00000397942.3 SOCS6-001

Description

suppressor of cytokine signaling 6 [Source:HGNC Symbol;Acc:16833]

Gene Synonyms

CIS-4, CIS4, Cish4, HSPC060, SOCS-4, SOCS-6, SOCS4, SSI4, STAI4, STATI4

Location

About this transcript

This transcript has 2 exons, is annotated with 15 domains and features, is associated with 18692 variant alleles and maps to 506 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000397942.3	SOCS6-001	5848	535aa	ENSP00000381034.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11998	J3KTM7 O14544	NM_004232.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000582322.1	SOCS6-002	2625	535aa	ENSP00000463395.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11998	J3KTM7 O14544	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000578377.1	SOCS6-003	894	227aa	ENSP00000463064.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KTM7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 5,848 bps, Translation length: 535 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O14544

CCDS

This transcript is a member of the Human CCDS set: CCDS11998

Version

ENST00000397942.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000256270 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.