Transcript: ENST00000548118.2 ATF7-009

Description

activating transcription factor 7 [Source:HGNC Symbol;Acc:792]

Gene Synonyms

ATFA

Location

Chromosome 12: 53,936,671-54,019,780 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 9 domains and features, is associated with 32738 variant alleles and maps to 220 oligo probes.

Gene

This transcript is a product of gene ENSG00000170653.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000420353.2	ATF7-001	6680	483aa	ENSP00000399465.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44906	F8VWG7 K7EKZ7 P17544	NM_006856.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000415113.1	ATF7-202	6623	462aa	ENSP00000404880.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P17544	NM_001130060.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000328463.7	ATF7-201	6582	494aa	ENSP00000329212.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VWG7 K7EKZ7 K7ESA4 P17544	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000456903.4	ATF7-006	5218	483aa	ENSP00000387406.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44906	F8VWG7 K7EKZ7 P17544	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000548446.2	ATF7-007	1892	494aa	ENSP00000449938.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VWG7 K7EKZ7 K7ESA4 P17544	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000591397.1	ATF7-002	860	117aa	ENSP00000465192.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58238	P17544	NM_001206682.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000548118.2	ATF7-009	774	117aa	ENSP00000456858.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58238	P17544	NM_001206683.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000588232.1	ATF7-010	531	79aa	ENSP00000465850.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VWG7 K7EKZ7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000588078.1	ATF7-011	531	163aa	ENSP00000468623.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ESA4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000551480.2	ATF7-005	473	78aa	ENSP00000449817.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VWG7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000546661.1	ATF7-003	1125	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000551087.1	ATF7-004	576	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000550373.2	ATF7-008	470	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000589726.1	ATF7-013	379	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 774 bps, Translation length: 117 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P17544

CCDS

This transcript is a member of the Human CCDS set: CCDS58238

Version

ENST00000548118.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000460677 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000548118.2 ATF7-009

Summary