Transcript: ENST00000307296.3 PDCD6IP-001

Description

programmed cell death 6 interacting protein [Source:HGNC Symbol;Acc:8766]

Gene Synonyms

AIP1, ALIX, Alix, DRIP4, HP95, Hp95, KIAA1375

Location

Chromosome 3: 33,839,844-33,911,194 forward strand.

About this transcript

This transcript has 18 exons, is annotated with 18 domains and features, is associated with 30304 variant alleles and maps to 1189 oligo probes.

Gene

This transcript is a product of gene ENSG00000170248.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000307296.3	PDCD6IP-001	6161	868aa	ENSP00000307387.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2660	Q8WUM4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000457054.2	PDCD6IP-201	5954	873aa	ENSP00000411825.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54561	Q8WUM4	NM_013374.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000413073.1	PDCD6IP-006	566	153aa	ENSP00000406693.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9IZF9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000412887.1	PDCD6IP-011	842	95aa	ENSP00000415150.1	Nonsense mediated decay		F8WDK9	-	-
ENST00000435909.1	PDCD6IP-005	587	72aa	ENSP00000393777.1	Nonsense mediated decay		F8WEQ7	-	-
ENST00000430877.1	PDCD6IP-003	582	78aa	ENSP00000398895.1	Nonsense mediated decay		F8WBR8	-	-
ENST00000498147.1	PDCD6IP-002	802	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000482561.1	PDCD6IP-017	626	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484478.1	PDCD6IP-004	596	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477798.1	PDCD6IP-008	587	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000495235.2	PDCD6IP-014	428	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000465122.1	PDCD6IP-012	894	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000489869.1	PDCD6IP-015	842	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000487821.1	PDCD6IP-010	750	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000459659.1	PDCD6IP-009	662	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000494810.1	PDCD6IP-007	619	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000473593.1	PDCD6IP-016	540	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 18, Coding exons: 18, Transcript length: 6,161 bps, Translation length: 868 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8WUM4

CCDS

This transcript is a member of the Human CCDS set: CCDS2660

Version

ENST00000307296.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000253251 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000307296.3 PDCD6IP-001

Summary