Transcript: ENST00000544665.3 ITGAM-001

Description

integrin, alpha M (complement component 3 receptor 3 subunit) [Source:HGNC Symbol;Acc:6149]

Gene Synonyms

CD11B, CR3A, MAC-1, MAC1A, MO1A, SLEB6

Location

Chromosome 16: 31,271,315-31,344,213 forward strand.

About this transcript

This transcript has 30 exons, is annotated with 47 domains and features, is associated with 33713 variant alleles and maps to 739 oligo probes.

Gene

This transcript is a product of gene ENSG00000169896.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000544665.3	ITGAM-001	4718	1153aa	ENSP00000441691.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54004	B3KXM6 P11215	NM_001145808.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000287497.8	ITGAM-002	3595	1152aa	ENSP00000287497.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45470	B3KXM6 P11215	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000565142.1	ITGAM-008	516	117aa	ENSP00000461850.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3NI33	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000567031.1	ITGAM-003	494	165aa	ENSP00000454568.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000561838.1	ITGAM-005	557	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000569746.1	ITGAM-006	557	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000570242.1	ITGAM-004	428	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000567178.1	ITGAM-007	378	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 30, Coding exons: 30, Transcript length: 4,718 bps, Translation length: 1,153 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P11215

CCDS

This transcript is a member of the Human CCDS set: CCDS54004

Version

ENST00000544665.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000432817 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000544665.3 ITGAM-001

Summary