Transcript: ENST00000584600.1 STRA13-008

Description

stimulated by retinoic acid 13 [Source:HGNC Symbol;Acc:11422]

Gene Synonyms

CENP-X, CENPX, D9, FAAP10, MGC14480, MHF2

Location

Chromosome 17: 79,976,579-79,980,734 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 1 domain and feature, is associated with 2474 variant alleles and maps to 270 oligo probes.

Gene

This transcript is a product of gene ENSG00000169689.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000392359.3	STRA13-002	805	81aa	ENSP00000376168.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59303	A8MT69	NM_001271006.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000584347.1	STRA13-006	799	131aa	ENSP00000464357.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QRS1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000306704.6	STRA13-001	751	63aa	ENSP00000302951.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32772	A8MT69	NM_144998.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000584600.1	STRA13-008	730	75aa	ENSP00000463974.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QR01	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000580435.1	STRA13-003	710	58aa	ENSP00000462015.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59302	A8MT69	NM_001271007.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000579520.1	STRA13-004	702	66aa	ENSP00000464024.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000583767.1	STRA13-009	894	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000584514.1	STRA13-011	882	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000577379.1	STRA13-010	861	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000580090.1	STRA13-007	752	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000585091.1	STRA13-005	739	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 730 bps, Translation length: 75 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000584600.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000441993 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000584600.1 STRA13-008

Summary