Transcript: ENST00000567710.1 NSMCE1-013

Description

non-SMC element 1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:29897]

Gene Synonyms

NSE1

Location

Chromosome 16: 27,246,536-27,280,054 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 3 domains and features, is associated with 13696 variant alleles and maps to 99 oligo probes.

Gene

This transcript is a product of gene ENSG00000169189.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000361439.4	NSMCE1-001	1067	266aa	ENSP00000355077.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10628	H3BN81 H3BR73 H3BSL0 Q8WV22	NM_145080.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000563273.1	NSMCE1-014	626	193aa	ENSP00000458859.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BN81 H3BR73 H3BSL0 I3L1I3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000564342.1	NSMCE1-012	625	144aa	ENSP00000456103.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BN81 H3BR73 H3BSL0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000563900.1	NSMCE1-007	493	138aa	ENSP00000456754.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BN81 H3BSL0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000567710.1	NSMCE1-013	472	73aa	ENSP00000454726.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BN81	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000562039.1	NSMCE1-005	260	78aa	ENSP00000457893.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BV05	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000569236.1	NSMCE1-002	1782	70aa	ENSP00000456053.1	Nonsense mediated decay		H3BR31	-	-
ENST00000566087.1	NSMCE1-009	878	70aa	ENSP00000455237.1	Nonsense mediated decay		H3BR31	-	-
ENST00000565384.1	NSMCE1-004	580	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000563512.1	NSMCE1-010	552	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000567375.1	NSMCE1-011	309	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000565070.1	NSMCE1-003	1853	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000561960.1	NSMCE1-006	609	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000565626.1	NSMCE1-008	259	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 472 bps, Translation length: 73 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000567710.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000435053 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000567710.1 NSMCE1-013

Summary