Transcript: ENST00000302118.5 PCSK9-001

Description

proprotein convertase subtilisin/kexin type 9 [Source:HGNC Symbol;Acc:20001]

Gene Synonyms

FH3, HCHOLA3, LDLCQ1, NARC-1, NARC1, PC9

Location

About this transcript

This transcript has 12 exons, is annotated with 16 domains and features, is associated with 12117 variant alleles and maps to 586 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000302118.5	PCSK9-001	3637	692aa	ENSP00000303208.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS603	Q8NBP7	NM_174936.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543384.1	PCSK9-202	1541	266aa	ENSP00000441859.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GWF0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000452118.2	PCSK9-201	1101	205aa	ENSP00000401598.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DEZ9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000490692.1	PCSK9-002	3891	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 3,637 bps, Translation length: 692 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8NBP7

CCDS

This transcript is a member of the Human CCDS set: CCDS603

Version

ENST00000302118.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000022280 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.