Transcript: ENST00000421117.1 E2F6-006

Description

E2F transcription factor 6 [Source:HGNC Symbol;Acc:3120]

Gene Synonyms

E2F-6

Location

Chromosome 2: 11,587,882-11,606,297 reverse strand.

About this transcript

This transcript has 5 exons, is associated with 8601 variant alleles and maps to 328 oligo probes.

Gene

This transcript is a product of gene ENSG00000169016.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000381525.3	E2F6-001	3218	281aa	ENSP00000370936.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1680	O75461 Q53YM3 Q6Q9Z5	NM_212540.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000362009.4	E2F6-202	1078	133aa	ENSP00000355036.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z1I8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542100.1	E2F6-203	1050	206aa	ENSP00000446315.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS62858	O75461 Q53YM3 Q6Q9Z5	NM_001278277.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000307236.4	E2F6-201	917	249aa	ENSP00000302159.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS62859	G5E936 Q53YM3 Q6Q9Z5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000546212.1	E2F6-204	791	206aa	ENSP00000438864.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS62858	O75461 Q53YM3 Q6Q9Z5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000444832.1	E2F6-002	3296	50aa	ENSP00000413678.1	Nonsense mediated decay		Q2Z197	-	-
ENST00000428221.1	E2F6-010	3139	63aa	ENSP00000407650.1	Nonsense mediated decay		F8WEZ5	-	-
ENST00000455198.1	E2F6-003	2227	50aa	ENSP00000403449.1	Nonsense mediated decay		Q2Z197	-	-
ENST00000437573.1	E2F6-004	1253	55aa	ENSP00000406891.1	Nonsense mediated decay		F8WC40	-	-
ENST00000421117.1	E2F6-006	907	38aa	ENSP00000389113.1	Nonsense mediated decay		Q2Z196	-	-
ENST00000468775.1	E2F6-009	1061	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000471343.1	E2F6-008	970	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000498701.1	E2F6-005	610	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 2, Transcript length: 907 bps, Translation length: 38 residues

Version

ENST00000421117.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000324056 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000421117.1 E2F6-006

Summary