Transcript: ENST00000334530.5 REEP4-002

Description

receptor accessory protein 4 [Source:HGNC Symbol;Acc:26176]

Gene Synonyms

C8orf20, FLJ22246, FLJ22277, PP432

Location

Chromosome 8: 21,995,533-21,999,366 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 6 domains and features, is associated with 2205 variant alleles and maps to 384 oligo probes.

Gene

This transcript is a product of gene ENSG00000168476.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000306306.3	REEP4-001	1710	257aa	ENSP00000303482.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6024	Q9H6H4	NM_025232.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000334530.5	REEP4-002	1476	173aa	ENSP00000333889.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9H6H4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518664.1	REEP4-009	996	192aa	ENSP00000428160.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RJV5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000523293.1	REEP4-004	913	251aa	ENSP00000428709.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RGS2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000521744.1	REEP4-007	635	55aa	ENSP00000429451.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RIB5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000519074.1	REEP4-003	1212	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000519875.1	REEP4-005	732	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 1,476 bps, Translation length: 173 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9H6H4

Version

ENST00000334530.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000375349 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000334530.5 REEP4-002

Summary