Transcript: ENST00000343070.2 SCNN1B-001

Description

sodium channel, non-voltage-gated 1, beta subunit [Source:HGNC Symbol;Acc:10600]

Gene Synonyms

BESC1, ENaCb, ENaCbeta, SCNEB

Location

Chromosome 16: 23,313,591-23,392,620 forward strand.

About this transcript

This transcript has 13 exons, is annotated with 23 domains and features, is associated with 37392 variant alleles and maps to 485 oligo probes.

Gene

This transcript is a product of gene ENSG00000168447.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000343070.2	SCNN1B-001	2597	640aa	ENSP00000345751.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10609	B2R812 P51168	NM_000336.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000307331.5	SCNN1B-002	2085	685aa	ENSP00000302874.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B2R812 P51168 Q8WY57	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000568923.1	SCNN1B-007	1852	613aa	ENSP00000456309.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BRM4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000568085.1	SCNN1B-006	1825	604aa	ENSP00000455673.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BQ95	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000564275.1	SCNN1B-005	1829	296aa	ENSP00000457754.1	Nonsense mediated decay		H3BUQ8	-	-
ENST00000569789.1	SCNN1B-008	610	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000566647.1	SCNN1B-003	519	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000566441.1	SCNN1B-004	749	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000566870.1	SCNN1B-009	560	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 12, Transcript length: 2,597 bps, Translation length: 640 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P51168

CCDS

This transcript is a member of the Human CCDS set: CCDS10609

Version

ENST00000343070.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000254495 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000343070.2 SCNN1B-001

Summary