Transcript: ENST00000459701.2 ACOX2-002

Description

acyl-CoA oxidase 2, branched chain [Source:HGNC Symbol;Acc:120]

Gene Synonyms

BCOX, BRCACOX, BRCOX, THCCox

Location

Chromosome 3: 58,490,863-58,523,010 reverse strand.

About this transcript

This transcript has 15 exons, is annotated with 14 domains and features, is associated with 13723 variant alleles and maps to 551 oligo probes.

Gene

This transcript is a product of gene ENSG00000168306.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000302819.5	ACOX2-001	2426	681aa	ENSP00000307697.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33775	B4DPM1 C9JY29 Q99424	NM_003500.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000459701.2	ACOX2-002	2348	667aa	ENSP00000418562.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J0G0 C9JY29	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000474098.1	ACOX2-004	708	171aa	ENSP00000419927.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JY29	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000489472.1	ACOX2-010	869	107aa	ENSP00000418515.1	Nonsense mediated decay		H7C4Y2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000492530.1	ACOX2-008	578	13aa	ENSP00000419133.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000460921.1	ACOX2-014	540	93aa	ENSP00000417877.1	Nonsense mediated decay		H7C4Q2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000481527.1	ACOX2-013	642	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000475143.1	ACOX2-007	426	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467738.1	ACOX2-012	1072	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000466689.1	ACOX2-006	799	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000480791.1	ACOX2-005	693	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000459888.1	ACOX2-011	565	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000466810.1	ACOX2-009	558	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 15, Coding exons: 14, Transcript length: 2,348 bps, Translation length: 667 residues

Version

ENST00000459701.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000353542 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000459701.2 ACOX2-002

Summary