Transcript: ENST00000538426.1 OTUB1-001

Description

OTU domain, ubiquitin aldehyde binding 1 [Source:HGNC Symbol;Acc:23077]

Gene Synonyms

FLJ20113, FLJ40710, OTB1, OTU1

Location

Chromosome 11: 63,753,885-63,765,887 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 7 domains and features, is associated with 5995 variant alleles and maps to 542 oligo probes.

Gene

This transcript is a product of gene ENSG00000167770.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000541478.1	OTUB1-005	1803	170aa	ENSP00000439142.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H3F0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538426.1	OTUB1-001	1729	271aa	ENSP00000444357.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8055	F5GYN4 Q96FW1	NM_017670.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543004.1	OTUB1-008	1647	280aa	ENSP00000437453.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H6Q1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000535715.1	OTUB1-010	1391	286aa	ENSP00000440211.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GYJ8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000428192.2	OTUB1-012	1296	271aa	ENSP00000402551.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8055	F5GYN4 Q96FW1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000422031.2	OTUB1-201	1296	308aa	ENSP00000416973.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GYN4 J3KR44	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543988.1	OTUB1-003	1259	241aa	ENSP00000441328.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GYN4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000535140.1	OTUB1-009	638	102aa	ENSP00000444968.1	Nonsense mediated decay		F5H4F3	-	-
ENST00000536443.1	OTUB1-007	553	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000536943.1	OTUB1-011	458	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000301453.3	OTUB1-002	2493	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000447683.2	OTUB1-004	2315	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,729 bps, Translation length: 271 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96FW1

CCDS

This transcript is a member of the Human CCDS set: CCDS8055

Version

ENST00000538426.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000396277 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000538426.1 OTUB1-001

Summary