Transcript: ENST00000372546.4 DOLPP1-001

Description

dolichyldiphosphatase 1 [Source:HGNC Symbol;Acc:29565]

Gene Synonyms

LSFR2

Location

Chromosome 9: 131,843,379-131,852,714 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 10 domains and features, is associated with 4416 variant alleles and maps to 392 oligo probes.

Gene

This transcript is a product of gene ENSG00000167130.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000372546.4	DOLPP1-001	2177	238aa	ENSP00000361625.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6918	Q86YN1	NM_020438.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000406974.3	DOLPP1-003	2037	195aa	ENSP00000384043.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS48039	Q86YN1 Q8IUV4	NM_001135917.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540102.1	DOLPP1-201	1931	97aa	ENSP00000440218.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8IUV4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000327812.8	DOLPP1-002	1932	91aa	ENSP00000333294.8	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000412363.1	DOLPP1-005	911	89aa	ENSP00000403278.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000480255.2	DOLPP1-004	344	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 2,177 bps, Translation length: 238 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q86YN1

CCDS

This transcript is a member of the Human CCDS set: CCDS6918

Version

ENST00000372546.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000054548 (version 4)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000372546.4 DOLPP1-001

Summary