Transcript: ENST00000420512.1 CERCAM-001

Description

cerebral endothelial cell adhesion molecule [Source:HGNC Symbol;Acc:23723]

Gene Synonyms

CEECAM1, CerCAM, GLT25D3, KIAA1502

Location

Chromosome 9: 131,181,886-131,190,702 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 3 domains and features, is associated with 4428 variant alleles and maps to 228 oligo probes.

Gene

This transcript is a product of gene ENSG00000167123.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000372842.1	CERCAM-005	5197	517aa	ENSP00000361933.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS69675	B7ZBS8 B7ZBS9 B7ZBT0 Q5T4B2	NM_001286760.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000372838.4	CERCAM-002	2685	595aa	ENSP00000361929.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6901	B7ZBS8 B7ZBS9 B7ZBT0 Q5T4B2	NM_016174.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000411852.1	CERCAM-011	1176	79aa	ENSP00000403766.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7ZBS8 B7ZBS9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000420512.1	CERCAM-001	887	218aa	ENSP00000416676.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7ZBS8 B7ZBS9 B7ZBT0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000420034.1	CERCAM-009	551	64aa	ENSP00000402508.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7ZBS8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000447915.1	CERCAM-010	530	109aa	ENSP00000402928.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7ZBS8 B7ZBS9 B7ZBT0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000493788.1	CERCAM-003	901	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000483893.1	CERCAM-013	587	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000487001.2	CERCAM-004	553	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472858.1	CERCAM-014	338	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463535.1	CERCAM-006	1205	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000483737.1	CERCAM-012	481	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 887 bps, Translation length: 218 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000420512.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000054434 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000420512.1 CERCAM-001

Summary