Transcript: ENST00000519031.1 ACSM1-005

Description

acyl-CoA synthetase medium-chain family member 1 [Source:HGNC Symbol;Acc:18049]

Gene Synonyms

BUCS1, LAE, MACS1

Location

Chromosome 16: 20,634,559-20,687,483 reverse strand.

About this transcript

This transcript has 10 exons, is associated with 22091 variant alleles and maps to 435 oligo probes.

Gene

This transcript is a product of gene ENSG00000166743.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000219151.4	ACSM1-201	2147	228aa	ENSP00000219151.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O75203	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000307493.4	ACSM1-001	2051	577aa	ENSP00000301956.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10587	E5RFK0 Q08AH1	NM_052956.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000520010.1	ACSM1-002	1894	577aa	ENSP00000428047.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10587	E5RFK0 Q08AH1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000524149.1	ACSM1-006	809	249aa	ENSP00000428098.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000523065.1	ACSM1-003	701	154aa	ENSP00000428830.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFK0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000519745.1	ACSM1-004	1568	204aa	ENSP00000428650.1	Nonsense mediated decay		E5RFK0 Q08AH1	-	-
ENST00000519031.1	ACSM1-005	1839	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 0, Transcript length: 1,839 bps,

Version

ENST00000519031.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000378372 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000519031.1 ACSM1-005

Summary