Transcript: ENST00000375498.2 HTR3A-202

Description

5-hydroxytryptamine (serotonin) receptor 3A, ionotropic [Source:HGNC Symbol;Acc:5297]

Gene Synonyms

5-HT-3, 5-HT3A, 5-HT3R, 5HT3R, HTR3

Location

Chromosome 11: 113,845,797-113,861,032 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 30 domains and features, is associated with 7703 variant alleles and maps to 516 oligo probes.

Gene

This transcript is a product of gene ENSG00000166736.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000504030.2	HTR3A-001	2432	478aa	ENSP00000424189.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3VRG0 B3VRG5 B3VRH0 B3VRH5 B3VRI0 B3VRI5 B3VRJ5 B3VRK0 P46098 Q9UEP2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000355556.2	HTR3A-201	2331	516aa	ENSP00000347754.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8366	B3VRG0 B3VRG5 B3VRH0 B3VRH5 B3VRI0 B3VRI5 B3VRJ5 B3VRK0 P46098	NM_213621.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000375498.2	HTR3A-202	2235	484aa	ENSP00000364648.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8365	B3VRG0 B3VRG5 B3VRH0 B3VRH5 B3VRI0 B3VRI5 B3VRJ5 B3VRK0 P46098 Q9UEP2	NM_000869.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000506841.2	HTR3A-002	2221	510aa	ENSP00000424776.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3VRG0 B3VRG5 B3VRH0 B3VRH5 B3VRI0 B3VRI5 B3VRJ5 B3VRK0 P46098	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000299961.5	HTR3A-003	1994	463aa	ENSP00000299961.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53710	B3VRG0 B3VRG5 B3VRH0 B3VRH5 B3VRI0 B3VRI5 B3VRJ5 P46098 Q9UEP2	NM_001161772.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000535865.1	HTR3A-203	1385	222aa	ENSP00000437776.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3VRG0 B3VRG5 Q9UEP2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000510849.1	HTR3A-004	1385	238aa	ENSP00000423653.1	Nonsense mediated decay		B3VRI0 B3VRI5 B3VRJ5 B3VRK0	-	-
ENST00000502622.1	HTR3A-005	906	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 2,235 bps, Translation length: 484 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P46098

CCDS

This transcript is a member of the Human CCDS set: CCDS8365

Version

ENST00000375498.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000375498.2 HTR3A-202

Summary