Transcript: ENST00000305253.4 TUB-002

Description

tubby bipartite transcription factor [Source:HGNC Symbol;Acc:12406]

Gene Synonyms

rd5

Location

About this transcript

This transcript has 13 exons, is annotated with 29 domains and features, is associated with 31817 variant alleles and maps to 753 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000305253.4	TUB-002	6420	561aa	ENSP00000305426.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7786	P50607 Q9H4D2	NM_003320.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000299506.2	TUB-003	2019	506aa	ENSP00000299506.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7787	P50607 Q9H4D2	NM_177972.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000534099.1	TUB-001	1759	512aa	ENSP00000434400.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PQR4 Q9H4D2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 6,420 bps, Translation length: 561 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P50607

CCDS

This transcript is a member of the Human CCDS set: CCDS7786

Version

ENST00000305253.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000385822 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.