Transcript: ENST00000560557.1 FAM227B-014

Description

family with sequence similarity 227, member B [Source:HGNC Symbol;Acc:26543]

Gene Synonyms

C15orf33, FLJ32800

Location

Chromosome 15: 49,620,590-49,626,499 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 2545 variant alleles and maps to 75 oligo probes.

Gene

This transcript is a product of gene ENSG00000166262.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000559573.1	FAM227B-003	2204	152aa	ENSP00000453251.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000299338.6	FAM227B-001	2008	508aa	ENSP00000299338.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32237	H0YLX5 Q96M60	NM_152647.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000561064.1	FAM227B-002	1596	304aa	ENSP00000453028.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YLX5 Q96M60	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000558594.1	FAM227B-004	1139	166aa	ENSP00000452616.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YK12	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000558579.1	FAM227B-011	982	134aa	ENSP00000453787.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000560246.1	FAM227B-008	911	178aa	ENSP00000454081.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YNN2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000559905.1	FAM227B-006	792	182aa	ENSP00000453379.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YLX5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000561116.1	FAM227B-013	562	47aa	ENSP00000453748.1	Nonsense mediated decay		H0YMU4	-	-
ENST00000558862.1	FAM227B-007	672	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000560557.1	FAM227B-014	438	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000559351.1	FAM227B-012	415	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000561319.1	FAM227B-009	918	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000558615.1	FAM227B-010	918	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000557892.1	FAM227B-005	569	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 438 bps,

Version

ENST00000560557.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000417873 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000560557.1 FAM227B-014

Summary