Transcript: ENST00000468790.1 CASP7-007

Description

caspase 7, apoptosis-related cysteine peptidase [Source:HGNC Symbol;Acc:1508]

Gene Synonyms

CASP-7, CMH-1, ICE-LAP3, LICE2, MCH3

Location

Chromosome 10: 115,478,969-115,481,445 forward strand.

About this transcript

This transcript has 3 exons, is associated with 1011 variant alleles and maps to 84 oligo probes.

Gene

This transcript is a product of gene ENSG00000165806.15 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000369321.2	CASP7-201	2694	336aa	ENSP00000358327.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7580	P55210 Q5SVL2	NM_033338.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000345633.4	CASP7-005	2659	303aa	ENSP00000298701.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7581	P55210 Q5SVL2	NM_033339.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000369315.1	CASP7-002	2421	303aa	ENSP00000358321.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7581	P55210 Q5SVL2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000369331.4	CASP7-003	2380	253aa	ENSP00000358337.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7582	P55210	NM_033340.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000369318.3	CASP7-001	2377	303aa	ENSP00000358324.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7581	P55210 Q5SVL2	NM_001267057.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000452490.2	CASP7-202	1148	278aa	ENSP00000398107.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58096	P55210	NM_001267058.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000429617.1	CASP7-004	834	222aa	ENSP00000400094.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5SVL2	NM_001267056.1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000468790.1	CASP7-007	607	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000487232.1	CASP7-008	799	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 607 bps,

Version

ENST00000468790.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000050441 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000468790.1 CASP7-007

Summary