Transcript: ENST00000342443.6 TSHR-003

Description

thyroid stimulating hormone receptor [Source:HGNC Symbol;Acc:12373]

Gene Synonyms

CHNG1, LGR3, hTSHR-I

Location

Chromosome 14: 81,421,775-81,575,294 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 15 domains and features, is associated with 62285 variant alleles and maps to 428 oligo probes.

Gene

This transcript is a product of gene ENSG00000165409.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000541158.2	TSHR-001	4566	764aa	ENSP00000441235.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9872	F5GYU5 Q0VAP8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000298171.2	TSHR-201	4400	764aa	ENSP00000298171.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9872	F5GYU5 Q0VAP8	NM_000369.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000342443.6	TSHR-003	1281	253aa	ENSP00000340113.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32131	P16473 Q0VAP8	NM_001142626.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000554263.1	TSHR-004	1184	231aa	ENSP00000451202.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q0VAP8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000554435.1	TSHR-005	1089	274aa	ENSP00000450549.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55935	P16473 Q0VAP8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000555326.1	TSHR-008	557	112aa	ENSP00000451092.1	Nonsense mediated decay		G3V381	-	-
ENST00000557096.1	TSHR-006	633	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000553763.1	TSHR-007	562	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000556031.1	TSHR-009	333	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,281 bps, Translation length: 253 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P16473

CCDS

This transcript is a member of the Human CCDS set: CCDS32131

Version

ENST00000342443.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000413366 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000342443.6 TSHR-003

Summary