Transcript: ENST00000339174.5 NLGN4Y-005

Description

neuroligin 4, Y-linked [Source:HGNC Symbol;Acc:15529]

Gene Synonyms

KIAA0951

Location

Chromosome Y: 16,636,454-16,955,527 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 15 domains and features, is associated with 18203 variant alleles and maps to 525 oligo probes.

Gene

This transcript is a product of gene ENSG00000165246.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000382872.1	NLGN4Y-001	6617	648aa	ENSP00000372325.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56619	Q8NFZ3	-	-
ENST00000382868.1	NLGN4Y-003	5338	873aa	ENSP00000372320.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6NMU8	-	-
ENST00000339174.5	NLGN4Y-005	5310	816aa	ENSP00000342535.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14788	Q8NFZ3	-	-
ENST00000355905.2	NLGN4Y-002	5167	816aa	ENSP00000348169.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14788	Q8NFZ3	-	-
ENST00000297967.5	NLGN4Y-201	882	256aa	ENSP00000297967.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55553	Q8NFZ3	NM_001164238.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000413217.1	NLGN4Y-006	722	236aa	ENSP00000412638.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000476359.1	NLGN4Y-004	5460	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000471252.1	NLGN4Y-007	793	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000481089.1	NLGN4Y-008	540	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 5,310 bps, Translation length: 816 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8NFZ3

CCDS

This transcript is a member of the Human CCDS set: CCDS14788

Version

ENST00000339174.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000089065 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000339174.5 NLGN4Y-005

Summary