Transcript: ENST00000523829.1 TMEM71-003

Description

transmembrane protein 71 [Source:HGNC Symbol;Acc:26572]

Gene Synonyms

FLJ33069

Location

Chromosome 8: 133,722,194-133,772,807 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 3 domains and features, is associated with 23683 variant alleles and maps to 404 oligo probes.

Gene

This transcript is a product of gene ENSG00000165071.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000356838.3	TMEM71-001	1993	276aa	ENSP00000349296.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6366	E5RGD3 E5RH69 Q6P5X7	NM_144649.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000523829.1	TMEM71-003	1971	313aa	ENSP00000428228.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RGD3 E5RH69 E5RHR5 E5RIQ3 E5RJJ0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000377901.4	TMEM71-002	1861	232aa	ENSP00000367133.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47921	E5RGD3 E5RH69 E5RHR5 E5RIQ3 Q6P5X7	NM_001145153.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000522334.1	TMEM71-007	596	63aa	ENSP00000430847.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RHR5 E5RIQ3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000522780.1	TMEM71-010	558	100aa	ENSP00000428772.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000519187.1	TMEM71-005	556	99aa	ENSP00000429873.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RGD3 E5RH69	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000519016.1	TMEM71-008	545	41aa	ENSP00000428397.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RIQ3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000519304.1	TMEM71-004	496	91aa	ENSP00000430239.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RGD3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000517538.1	TMEM71-009	590	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000524079.1	TMEM71-011	387	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000522594.1	TMEM71-006	779	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 1,971 bps, Translation length: 313 residues

Version

ENST00000523829.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000379590 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000523829.1 TMEM71-003

Summary