Transcript: ENST00000422223.2 FREM1-202

Description

FRAS1 related extracellular matrix 1 [Source:HGNC Symbol;Acc:23399]

Gene Synonyms

BNAR, C9orf143, C9orf145, C9orf154, DKFZp686M16108, FLJ25461, MOTA, TILRR, TRIGNO2

Location

Chromosome 9: 14,734,664-14,910,993 reverse strand.

About this transcript

This transcript has 38 exons, is annotated with 13 domains and features, is associated with 97004 variant alleles and maps to 1010 oligo probes.

Gene

This transcript is a product of gene ENSG00000164946.15 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000380881.4	FREM1-201	10089	2180aa	ENSP00000370263.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JT55	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000422223.2	FREM1-202	10086	2179aa	ENSP00000412940.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47952	Q5H8C1	NM_144966.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000380880.3	FREM1-001	7324	2179aa	ENSP00000370262.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47952	Q5H8C1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000380894.1	FREM1-002	2481	715aa	ENSP00000370278.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55293	Q5H8C1	NM_001177704.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000380875.3	FREM1-005	6126	1335aa	ENSP00000370257.3	Nonsense mediated decay		F8WE85	-	-
ENST00000427623.1	FREM1-006	1421	222aa	ENSP00000412597.1	Nonsense mediated decay		Q5H8C1	-	-
ENST00000486223.1	FREM1-010	815	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000466679.1	FREM1-007	741	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000485068.1	FREM1-009	699	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000497634.2	FREM1-004	701	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 38, Coding exons: 36, Transcript length: 10,086 bps, Translation length: 2,179 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5H8C1

CCDS

This transcript is a member of the Human CCDS set: CCDS47952

Version

ENST00000422223.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000422223.2 FREM1-202

Summary