Transcript: ENST00000367363.3 RAET1E-001

Description

retinoic acid early transcript 1E [Source:HGNC Symbol;Acc:16793]

Gene Synonyms

LETAL, N2DL-4, N2DL4, NKG2DL4, RAET1E2, RL-4, ULBP4, bA350J20.7

Location

Chromosome 6: 150,209,634-150,212,170 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 9 domains and features, is associated with 1355 variant alleles and maps to 226 oligo probes.

Gene

This transcript is a product of gene ENSG00000164520.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000532335.1	RAET1E-003	2099	212aa	ENSP00000437067.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59043	E9PKJ6 I2GUA6 Q8TD07	NM_001243328.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000357183.4	RAET1E-002	958	263aa	ENSP00000349709.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5221	E9PKJ6 I2GUA6 Q8TD07	NM_139165.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000529948.1	RAET1E-005	875	209aa	ENSP00000432366.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59042	E9PKJ6 I2GUA6 Q8TD07	NM_001243327.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367363.3	RAET1E-001	817	227aa	ENSP00000356332.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59044	Q8TD07	NM_001243325.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000531073.1	RAET1E-006	643	80aa	ENSP00000433489.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PKJ6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000392270.3	RAET1E-004	743	117aa	ENSP00000376096.3	Nonsense mediated decay		E9PKJ6 Q3T1D4	-	-
ENST00000524905.1	RAET1E-007	611	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 817 bps, Translation length: 227 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8TD07

CCDS

This transcript is a member of the Human CCDS set: CCDS59044

Version

ENST00000367363.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000042658 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000367363.3 RAET1E-001

Summary