Transcript: ENST00000523916.1 CASP3-003

Description

caspase 3, apoptosis-related cysteine peptidase [Source:HGNC Symbol;Acc:1504]

Gene Synonyms

CPP32, CPP32B, SCA-1, Yama, apopain

Location

Chromosome 4: 185,548,850-185,570,663 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 17 domains and features, is associated with 9212 variant alleles and maps to 402 oligo probes.

Gene

This transcript is a product of gene ENSG00000164305.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000308394.4	CASP3-001	2673	277aa	ENSP00000311032.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3836	C9JXR7 P42574	NM_004346.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000393585.2	CASP3-002	2624	182aa	ENSP00000377210.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8MVM1 C9JXR7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000523916.1	CASP3-003	2540	277aa	ENSP00000428929.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3836	C9JXR7 P42574	NM_032991.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000517513.1	CASP3-006	964	182aa	ENSP00000428372.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8MVM1 C9JXR7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000393588.4	CASP3-005	677	182aa	ENSP00000377213.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8MVM1 C9JXR7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000447121.2	CASP3-004	549	117aa	ENSP00000407142.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JXR7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 2,540 bps, Translation length: 277 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P42574

CCDS

This transcript is a member of the Human CCDS set: CCDS3836

Version

ENST00000523916.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000257887 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Recent locations

Transcript: ENST00000523916.1 CASP3-003

Summary