Transcript: ENST00000312916.7 AGGF1-001

Description

angiogenic factor with G patch and FHA domains 1 [Source:HGNC Symbol;Acc:24684]

Gene Synonyms

FLJ10283, GPATC7, GPATCH7, HSU84971, HUS84971, VG5Q

Location

About this transcript

This transcript has 14 exons, is annotated with 16 domains and features, is associated with 17432 variant alleles and maps to 770 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000312916.7	AGGF1-001	4509	714aa	ENSP00000316109.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4035	A8K029 Q8N302	NM_018046.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000506806.1	AGGF1-002	1142	176aa	ENSP00000424733.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8N302	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000502408.1	AGGF1-003	825	87aa	ENSP00000420874.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000503538.1	AGGF1-004	552	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 4,509 bps, Translation length: 714 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8N302

CCDS

This transcript is a member of the Human CCDS set: CCDS4035

Version

ENST00000312916.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000219971 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.