Transcript: ENST00000405460.2 GPR98-001

Description

G protein-coupled receptor 98 [Source:HGNC Symbol;Acc:17416]

Gene Synonyms

DKFZp761P0710, FEB4, KIAA0686, KIAA1943, MASS1, USH2B, USH2C, VLGR1, VLGR1b

Location

Chromosome 5: 89,854,617-90,460,038 forward strand.

About this transcript

This transcript has 90 exons, is annotated with 109 domains and features, is associated with 254754 variant alleles and maps to 3171 oligo probes.

Gene

This transcript is a product of gene ENSG00000164199.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000405460.2	GPR98-001	19338	6306aa	ENSP00000384582.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47246	Q8WXG9	NM_032119.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000425867.2	GPR98-004	6503	1967aa	ENSP00000392618.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8WXG9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000509621.1	GPR98-003	5211	1608aa	ENSP00000422153.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000504142.1	GPR98-002	5046	1055aa	ENSP00000424736.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000508842.1	GPR98-006	582	148aa	ENSP00000425936.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RIF0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000450321.2	GPR98-012	879	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000507314.1	GPR98-008	617	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000512205.1	GPR98-005	592	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000505845.1	GPR98-010	395	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000513828.1	GPR98-009	596	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000503852.1	GPR98-011	404	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 90, Coding exons: 90, Transcript length: 19,338 bps, Translation length: 6,306 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8WXG9

CCDS

This transcript is a member of the Human CCDS set: CCDS47246

Version

ENST00000405460.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000369993 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000405460.2 GPR98-001

Summary