Transcript: ENST00000505056.1 SLC45A2-004

Description

solute carrier family 45, member 2 [Source:HGNC Symbol;Acc:16472]

Gene Synonyms

1A1, AIM-1, AIM1, MATP, OCA4, SHEP5

Location

Chromosome 5: 33,963,747-33,984,667 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 9144 variant alleles and maps to 135 oligo probes.

Gene

This transcript is a product of gene ENSG00000164175.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000382102.3	SLC45A2-002	2723	460aa	ENSP00000371534.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43308	Q9UMX9	NM_001012509.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000296589.4	SLC45A2-001	1772	530aa	ENSP00000296589.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3901	Q9UMX9	NM_016180.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000342059.3	SLC45A2-201	1537	471aa	ENSP00000341014.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RBP8 Q9UMX9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000509381.1	SLC45A2-003	1040	243aa	ENSP00000421100.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RGY6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000345083.5	SLC45A2-202	989	298aa	ENSP00000340444.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JK74	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000510600.1	SLC45A2-005	740	246aa	ENSP00000424010.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RBP8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000505056.1	SLC45A2-004	739	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 739 bps,

Version

ENST00000505056.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000367168 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000505056.1 SLC45A2-004

Summary