Transcript: ENST00000432042.1 RNF123-002

Description

ring finger protein 123 [Source:HGNC Symbol;Acc:21148]

Gene Synonyms

FLJ12565, KPC1

Location

Chromosome 3: 49,726,971-49,750,263 forward strand.

About this transcript

This transcript has 24 exons, is annotated with 11 domains and features, is associated with 10782 variant alleles and maps to 505 oligo probes.

Gene

This transcript is a product of gene ENSG00000164068.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000327697.6	RNF123-001	4311	1314aa	ENSP00000328287.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33758	C9JN91 Q5XPI4	NM_022064.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000432042.1	RNF123-002	2670	762aa	ENSP00000392443.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J266	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000433785.1	RNF123-007	1555	426aa	ENSP00000416156.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JI97	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000454491.1	RNF123-008	531	76aa	ENSP00000408490.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JN91	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000457726.1	RNF123-003	4506	721aa	ENSP00000394369.1	Nonsense mediated decay		C9JN91 C9JS59	-	-
ENST00000443204.1	RNF123-009	481	68aa	ENSP00000390856.1	Nonsense mediated decay		F8WB91	-	-
ENST00000444689.1	RNF123-012	442	25aa	ENSP00000413794.1	Nonsense mediated decay		H7C3U1	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000497099.1	RNF123-013	606	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000487805.2	RNF123-006	5882	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000486102.1	RNF123-005	4564	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000469978.1	RNF123-011	889	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000498376.1	RNF123-014	746	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000494005.1	RNF123-010	557	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 24, Coding exons: 21, Transcript length: 2,670 bps, Translation length: 762 residues

Version

ENST00000432042.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000346476 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000432042.1 RNF123-002

Summary