Transcript: ENST00000478843.1 PRKCD-004

Description

protein kinase C, delta [Source:HGNC Symbol;Acc:9399]

Gene Synonyms

CVID9, MAY1, PKCD, nPKC-delta

Location

Chromosome 3: 53,190,025-53,213,710 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 4 domains and features, is associated with 10182 variant alleles and maps to 110 oligo probes.

Gene

This transcript is a product of gene ENSG00000163932.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000394729.2	PRKCD-001	2810	676aa	ENSP00000378217.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2870	B4DFV1 C9J9P1 C9JZU8 Q05655	NM_212539.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000330452.3	PRKCD-002	2680	676aa	ENSP00000331602.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2870	B4DFV1 C9J9P1 C9JZU8 Q05655	NM_006254.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000464818.1	PRKCD-006	777	223aa	ENSP00000419629.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J9P1 C9JZU8 C9K0E3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000478843.1	PRKCD-004	589	77aa	ENSP00000419726.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JZU8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000487897.1	PRKCD-005	562	125aa	ENSP00000418106.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J9P1 C9JZU8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000477794.2	PRKCD-003	404	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 589 bps, Translation length: 77 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000478843.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000350371 (version 1)

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Transcript: ENST00000478843.1 PRKCD-004

Summary