Transcript: ENST00000413407.1 SENP2-002

Description

SUMO1/sentrin/SMT3 specific peptidase 2 [Source:HGNC Symbol;Acc:23116]

Gene Synonyms

AXAM2, DKFZp762A2316, KIAA1331, SMT3IP2

Location

Chromosome 3: 185,304,083-185,348,193 forward strand.

About this transcript

This transcript has 16 exons, is annotated with 2 domains and features, is associated with 19673 variant alleles and maps to 634 oligo probes.

Gene

This transcript is a product of gene ENSG00000163904.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000296257.5	SENP2-001	5717	589aa	ENSP00000296257.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33902	B4E2S4 J3KQD2 Q9HC62	NM_021627.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000427465.2	SENP2-201	2383	413aa	ENSP00000394562.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KQD2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000545472.1	SENP2-202	2108	579aa	ENSP00000439653.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DQ42 J3KQD2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000430355.1	SENP2-004	878	273aa	ENSP00000399156.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9IYB7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000444509.1	SENP2-012	610	203aa	ENSP00000399201.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C1A0	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000413407.1	SENP2-002	2383	104aa	ENSP00000388893.1	Nonsense mediated decay		F8WED7	-	-
ENST00000453532.1	SENP2-006	829	105aa	ENSP00000393197.1	Nonsense mediated decay		F8WET6	-	-
ENST00000439684.1	SENP2-007	596	60aa	ENSP00000390229.1	Nonsense mediated decay		F8WCX8	-	-
ENST00000458551.1	SENP2-008	553	54aa	ENSP00000408114.1	Nonsense mediated decay		F8WED6	-	-
ENST00000465201.1	SENP2-005	589	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000473760.1	SENP2-009	738	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000476011.1	SENP2-014	737	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000483005.1	SENP2-013	591	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000478001.1	SENP2-011	541	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000459883.1	SENP2-010	525	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 16, Coding exons: 4, Transcript length: 2,383 bps, Translation length: 104 residues

Version

ENST00000413407.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000345160 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000413407.1 SENP2-002

Summary