Transcript: ENST00000464879.1 RYK-005

Description

receptor-like tyrosine kinase [Source:HGNC Symbol;Acc:10481]

Gene Synonyms

D3S3195, JTK5, JTK5A, RYK1

Location

Chromosome 3: 133,921,381-133,926,369 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 2174 variant alleles and maps to 64 oligo probes.

Gene

This transcript is a product of gene ENSG00000163785.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq	Flags
ENST00000427044.2	RYK-202	2887	418aa	ENSP00000399527.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F5H8L5 Q8WTZ8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000296084.4	RYK-201	2846	608aa	ENSP00000296084.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F5H8L5 P34925 Q8WTZ8	NM_002958.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000460933.1	RYK-001	2783	587aa	ENSP00000419122.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000472234.1	RYK-007	470	156aa	ENSP00000475203.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U3KPT6	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000486725.1	RYK-004	586	93aa	ENSP00000417836.1	Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000484106.1	RYK-008	823	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000473208.1	RYK-006	5270	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000481382.1	RYK-003	578	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000480381.1	RYK-002	541	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000464879.1	RYK-005	392	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 392 bps,

Version

ENST00000464879.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000357162 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000464879.1 RYK-005

Summary