Transcript: ENST00000295886.4 NKX6-1-001

Description

NK6 homeobox 1 [Source:HGNC Symbol;Acc:7839]

Gene Synonyms

NKX6.1, NKX6A, Nkx6.1

Location

About this transcript

This transcript has 3 exons, is annotated with 18 domains and features, is associated with 3649 variant alleles and maps to 272 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000295886.4	NKX6-1-001	2628	367aa	ENSP00000295886.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3607	F8VWZ9 P78426	NM_006168.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000515820.2	NKX6-1-002	2194	93aa	ENSP00000449761.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VWZ9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 2,628 bps, Translation length: 367 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P78426

CCDS

This transcript is a member of the Human CCDS set: CCDS3607

Version

ENST00000295886.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000252814 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.