Transcript: ENST00000509970.1 MRPS18C-010

Description

mitochondrial ribosomal protein S18C [Source:HGNC Symbol;Acc:16633]

Gene Synonyms

CGI-134, FLJ11146, FLJ22967, MRP-S18-1, MRPS18-1

Location

Chromosome 4: 84,377,236-84,388,657 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 4 domains and features, is associated with 5301 variant alleles and maps to 230 oligo probes.

Gene

This transcript is a product of gene ENSG00000163319.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000295491.4	MRPS18C-001	1643	142aa	ENSP00000295491.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3604	Q9Y3D5	NM_016067.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000509970.1	MRPS18C-010	855	113aa	ENSP00000427014.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000507019.1	MRPS18C-003	666	114aa	ENSP00000427169.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RCM2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000505719.1	MRPS18C-005	490	92aa	ENSP00000425268.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0Y9W2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000507349.1	MRPS18C-006	350	68aa	ENSP00000426930.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RE70	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000509571.1	MRPS18C-009	442	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000512375.1	MRPS18C-002	2482	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000505525.1	MRPS18C-007	442	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000514581.1	MRPS18C-004	301	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 855 bps, Translation length: 113 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000509970.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000365067 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000509970.1 MRPS18C-010

Summary