Transcript: ENST00000532276.1 TTC9C-005

Description

tetratricopeptide repeat domain 9C [Source:HGNC Symbol;Acc:28432]

Gene Synonyms

MGC29649

Location

Chromosome 11: 62,502,922-62,507,756 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 7 domains and features, is associated with 2370 variant alleles and maps to 125 oligo probes.

Gene

This transcript is a product of gene ENSG00000162222.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000513247.2	TTC9C-201	1809	215aa	ENSP00000444031.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EST3 Q8WYY7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000316461.4	TTC9C-001	1080	171aa	ENSP00000325266.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8033	E9PKV8 H0YDR3 Q8N5M4	NM_173810.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000532583.1	TTC9C-002	858	171aa	ENSP00000434340.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8033	E9PKV8 H0YDR3 Q8N5M4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000530625.1	TTC9C-004	606	140aa	ENSP00000435282.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PKV8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000294161.6	TTC9C-003	1833	82aa	ENSP00000294161.6	Nonsense mediated decay		E7EST3	-	-
ENST00000532276.1	TTC9C-005	627	69aa	ENSP00000434137.1	Nonsense mediated decay		H0YDR3	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000601045.1	TTC9C-006	346	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 627 bps, Translation length: 69 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000532276.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000395340 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000532276.1 TTC9C-005

Summary