Transcript: ENST00000533088.1 PPP1R16A-003

Description

protein phosphatase 1, regulatory subunit 16A [Source:HGNC Symbol;Acc:14941]

Gene Synonyms

MGC14333, MYPT3

Location

Chromosome 8: 145,703,734-145,722,069 forward strand.

About this transcript

This transcript has 3 exons, is associated with 8911 variant alleles and maps to 157 oligo probes.

Gene

This transcript is a product of gene ENSG00000160972.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000292539.4	PPP1R16A-001	2722	528aa	ENSP00000292539.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6429	Q96I34	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000435887.1	PPP1R16A-201	2273	528aa	ENSP00000391126.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6429	Q96I34	NM_032902.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000528430.1	PPP1R16A-014	807	196aa	ENSP00000434324.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000526564.1	PPP1R16A-012	675	89aa	ENSP00000433267.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000529009.1	PPP1R16A-005	657	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000529283.1	PPP1R16A-007	636	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000533088.1	PPP1R16A-003	577	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000533829.1	PPP1R16A-004	558	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000526183.1	PPP1R16A-002	4311	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000532806.1	PPP1R16A-010	747	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000526643.1	PPP1R16A-009	663	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 577 bps,

Version

ENST00000533088.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000382458 (version 1)

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Transcript: ENST00000533088.1 PPP1R16A-003

Summary