Transcript: ENST00000481860.2 NLRX1-012

Description

NLR family member X1 [Source:HGNC Symbol;Acc:29890]

Gene Synonyms

CLR11.3, DLNB26, NOD26, NOD5, NOD9

Location

Chromosome 11: 119,039,451-119,052,066 forward strand.

About this transcript

This transcript has 7 exons, is associated with 5942 variant alleles and maps to 284 oligo probes.

Gene

This transcript is a product of gene ENSG00000160703.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000409109.1	NLRX1-004	4092	975aa	ENSP00000387334.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8416	B7Z889 C9J0R6 C9JLK8 C9JQE9 Q86UT6	NM_001282144.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000292199.2	NLRX1-001	3744	975aa	ENSP00000292199.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8416	B7Z889 C9J0R6 C9JLK8 C9JQE9 Q86UT6	NM_024618.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409991.1	NLRX1-003	3716	975aa	ENSP00000386851.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8416	B7Z889 C9J0R6 C9JLK8 C9JQE9 Q86UT6	NM_001282143.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409265.4	NLRX1-201	3039	921aa	ENSP00000386858.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z889 C9J0R6 C9JLK8 C9JQE9 Q86UT6	NM_170722.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000525863.1	NLRX1-005	2850	921aa	ENSP00000433442.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z889 C9J0R6 C9JLK8 C9JQE9 Q86UT6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000454811.1	NLRX1-006	762	151aa	ENSP00000400268.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J0R6 C9JLK8 C9JQE9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000449394.1	NLRX1-008	558	137aa	ENSP00000402801.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JLK8 C9JQE9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000422249.1	NLRX1-009	544	127aa	ENSP00000402381.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JLK8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000474751.2	NLRX1-011	721	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000469103.3	NLRX1-013	686	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468765.1	NLRX1-010	577	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000482180.1	NLRX1-007	533	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000481860.2	NLRX1-012	2585	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000524562.1	NLRX1-014	1671	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 0, Transcript length: 2,585 bps,

Version

ENST00000481860.2

Type

Retained intron

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000335411 (version 2)

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Recent locations

Transcript: ENST00000481860.2 NLRX1-012

Summary