Transcript: ENST00000292174.4 CXCR5-001

Description

chemokine (C-X-C motif) receptor 5 [Source:HGNC Symbol;Acc:1060]

Gene Synonyms

BLR1, CD185, MDR15

Location

About this transcript

This transcript has 2 exons, is annotated with 31 domains and features, is associated with 6534 variant alleles and maps to 437 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000292174.4	CXCR5-001	4431	372aa	ENSP00000292174.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8402	A0N0R2 P32302	NM_032966.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 4,431 bps, Translation length: 372 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P32302

CCDS

This transcript is a member of the Human CCDS set: CCDS8402

Version

ENST00000292174.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000389309 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.