Transcript: ENST00000587464.1 NLRP4-004

Description

NLR family, pyrin domain containing 4 [Source:HGNC Symbol;Acc:22943]

Gene Synonyms

CLR19.5, CT58, FLJ32126, NALP4, PAN2, PYPAF4, RNH2

Location

About this transcript

This transcript has 3 exons, is annotated with 7 domains and features, is associated with 13175 variant alleles and maps to 103 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000301295.6	NLRP4-001	3670	994aa	ENSP00000301295.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12936	K7ES09 Q96MN2	NM_134444.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000346986.5	NLRP4-201	3504	938aa	ENSP00000344787.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J9JIE2 K7ES09	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000587891.1	NLRP4-002	3201	919aa	ENSP00000465463.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96MN2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000589437.1	NLRP4-003	1781	504aa	ENSP00000468754.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000587464.1	NLRP4-004	572	155aa	ENSP00000468496.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ES09	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 572 bps, Translation length: 155 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000587464.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000458078 (version 1)