Transcript: ENST00000359624.3 CBS-002

Description

cystathionine-beta-synthase [Source:HGNC Symbol;Acc:1550]

Gene Synonyms

HIP4

Location

Chromosome 21: 44,473,301-44,496,472 reverse strand.

About this transcript

This transcript has 18 exons, is annotated with 13 domains and features, is associated with 6920 variant alleles and maps to 542 oligo probes.

Gene

This transcript is a product of gene ENSG00000160200.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000398165.3	CBS-003	2605	551aa	ENSP00000381231.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13693	C9JMA6 F5H2U1 P35520 Q3LR94 Q96EH7	NM_000071.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000352178.5	CBS-001	2583	551aa	ENSP00000344460.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13693	C9JMA6 F5H2U1 P35520 Q3LR94 Q96EH7	NM_001178008.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000398168.1	CBS-201	2554	565aa	ENSP00000381234.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JMA6 P35520 Q3LR94	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000398158.1	CBS-004	2453	551aa	ENSP00000381225.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13693	C9JMA6 F5H2U1 P35520 Q3LR94 Q96EH7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000359624.3	CBS-002	2353	551aa	ENSP00000352643.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13693	C9JMA6 F5H2U1 P35520 Q3LR94 Q96EH7	NM_001178009.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000544202.1	CBS-202	1703	463aa	ENSP00000439332.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H2U1 Q3LR94 Q96EH7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000430013.1	CBS-014	828	224aa	ENSP00000405929.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000441030.1	CBS-007	819	177aa	ENSP00000388235.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JMA6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000458223.1	CBS-015	676	159aa	ENSP00000408014.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000451248.1	CBS-016	573	149aa	ENSP00000402823.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000470912.1	CBS-008	894	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000478709.1	CBS-017	727	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000465732.1	CBS-009	683	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000488526.1	CBS-010	672	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000461686.1	CBS-005	2656	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000491776.1	CBS-006	1515	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000462349.1	CBS-013	1038	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000486098.1	CBS-012	773	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000496485.1	CBS-011	673	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 18, Coding exons: 15, Transcript length: 2,353 bps, Translation length: 551 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P35520

CCDS

This transcript is a member of the Human CCDS set: CCDS13693

Version

ENST00000359624.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000195524 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000359624.3 CBS-002

Summary