Transcript: ENST00000290341.3 IGF2BP1-001

Description

insulin-like growth factor 2 mRNA binding protein 1 [Source:HGNC Symbol;Acc:28866]

Gene Synonyms

CRD-BP, CRDBP, IMP-1, IMP1, VICKZ1, ZBP1

Location

Chromosome 17: 47,074,774-47,133,012 forward strand.

About this transcript

This transcript has 15 exons, is annotated with 32 domains and features, is associated with 28407 variant alleles and maps to 721 oligo probes.

Gene

This transcript is a product of gene ENSG00000159217.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000290341.3	IGF2BP1-001	8274	577aa	ENSP00000290341.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11543	D3DTW3 Q9NZI8	NM_006546.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000431824.2	IGF2BP1-002	1317	438aa	ENSP00000389135.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54138	Q9NZI8	NM_001160423.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000515586.1	IGF2BP1-004	768	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000510023.1	IGF2BP1-003	754	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000499130.2	IGF2BP1-005	568	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000505562.1	IGF2BP1-006	461	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 8,274 bps, Translation length: 577 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NZI8

CCDS

This transcript is a member of the Human CCDS set: CCDS11543

Version

ENST00000290341.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000364046 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000290341.3 IGF2BP1-001

Summary