Transcript: ENST00000521184.1 AGPAT6-002

Description

1-acylglycerol-3-phosphate O-acyltransferase 6 [Source:HGNC Symbol;Acc:20880]

Gene Synonyms

1-AGPAT 6, DKFZp586M1819, GPAT4, LPAAT-zeta, LPAATZ, TSARG7

Location

Chromosome 8: 41,434,706-41,456,133 forward strand.

About this transcript

This transcript has 2 exons, is associated with 9867 variant alleles and maps to 132 oligo probes.

Gene

This transcript is a product of gene ENSG00000158669.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000396987.3	AGPAT6-001	6298	456aa	ENSP00000380184.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6117	E5RGW3 E5RHA6 E5RIA1 Q2TU73 Q86UL3 Q8NDD3	NM_178819.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000520223.1	AGPAT6-003	1101	29aa	ENSP00000428648.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RGW3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000519853.1	AGPAT6-006	768	158aa	ENSP00000429477.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RIA1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000521806.1	AGPAT6-007	873	179aa	ENSP00000428630.1	Nonsense mediated decay		E5RGW3 E5RHA6	-	-
ENST00000520258.1	AGPAT6-004	870	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000521184.1	AGPAT6-002	572	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000521121.1	AGPAT6-005	520	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000518628.1	AGPAT6-010	1063	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000519921.1	AGPAT6-011	997	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000521349.1	AGPAT6-009	842	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000523906.1	AGPAT6-008	664	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 572 bps,

Version

ENST00000521184.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000377156 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000521184.1 AGPAT6-002

Summary