Transcript: ENST00000288976.3 PTPDC1-002

Description

protein tyrosine phosphatase domain containing 1 [Source:HGNC Symbol;Acc:30184]

Gene Synonyms

FLJ37312, PTP9Q22

Location

About this transcript

This transcript has 9 exons, is annotated with 11 domains and features, is associated with 11133 variant alleles and maps to 445 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000375360.3	PTPDC1-001	4517	754aa	ENSP00000364509.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6707	A2A3K4	NM_177995.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000288976.3	PTPDC1-002	4398	806aa	ENSP00000288976.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6708	A2A3K4	NM_152422.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000467049.1	PTPDC1-003	1861	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 4,398 bps, Translation length: 806 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A2A3K4

CCDS

This transcript is a member of the Human CCDS set: CCDS6708

Version

ENST00000288976.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000053171 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.