Transcript: ENST00000361704.2 BRE-005

Description

brain and reproductive organ-expressed (TNFRSF1A modulator) [Source:HGNC Symbol;Acc:1106]

Gene Synonyms

BRCC4, BRCC45

Location

Chromosome 2: 28,113,660-28,561,768 forward strand.

About this transcript

This transcript has 13 exons, is annotated with 3 domains and features, is associated with 176792 variant alleles and maps to 538 oligo probes.

Gene

This transcript is a product of gene ENSG00000158019.16 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000344773.2	BRE-001	1852	415aa	ENSP00000343412.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1764	C9J2G0 Q9NXR7	NM_004899.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000379632.2	BRE-002	1752	376aa	ENSP00000368953.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1765	C9J2G0 Q9NXR7	NM_199193.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000361704.2	BRE-005	1686	376aa	ENSP00000354699.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1765	C9J2G0 Q9NXR7	NM_199192.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000342045.2	BRE-004	1681	383aa	ENSP00000339371.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1763	C9J2G0 Q9NXR7	NM_199194.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000379624.1	BRE-003	1657	383aa	ENSP00000368945.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1763	C9J2G0 Q9NXR7	NM_199191.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000436924.1	BRE-006	874	153aa	ENSP00000392345.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J2G0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000379629.3	BRE-009	865	284aa	ENSP00000368950.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J2G0 F8W733	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000604932.1	BRE-011	500	166aa	ENSP00000474342.1	Non stop decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000603461.1	BRE-010	494	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000496951.1	BRE-008	738	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000492702.1	BRE-007	616	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 11, Transcript length: 1,686 bps, Translation length: 376 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NXR7

CCDS

This transcript is a member of the Human CCDS set: CCDS1765

Version

ENST00000361704.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000215115 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000361704.2 BRE-005

Summary