Transcript: ENST00000288266.3 APPL1-001

Description

adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1 [Source:HGNC Symbol;Acc:24035]

Gene Synonyms

APPL, DIP13A, DIP13alpha, KIAA1428

Location

Chromosome 3: 57,261,765-57,307,496 forward strand.

About this transcript

This transcript has 22 exons, is annotated with 17 domains and features, is associated with 19608 variant alleles and maps to 958 oligo probes.

Gene

This transcript is a product of gene ENSG00000157500.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000288266.3	APPL1-001	6058	709aa	ENSP00000288266.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2882	Q9UKG1	NM_012096.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000444459.1	APPL1-002	516	133aa	ENSP00000406095.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JAB0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000495803.1	APPL1-008	396	114aa	ENSP00000419644.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9K0C4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000482800.1	APPL1-005	2217	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000464446.1	APPL1-003	886	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000488530.1	APPL1-004	728	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000492501.1	APPL1-006	545	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000468342.1	APPL1-007	419	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 22, Coding exons: 22, Transcript length: 6,058 bps, Translation length: 709 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UKG1

CCDS

This transcript is a member of the Human CCDS set: CCDS2882

Version

ENST00000288266.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000258196 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000288266.3 APPL1-001

Summary