Transcript: ENST00000287437.3 NSMCE2-001

Description

non-SMC element 2, MMS21 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:26513]

Gene Synonyms

C8orf36, FLJ32440, MMS21, NSE2, ZMIZ7

Location

Chromosome 8: 126,104,095-126,379,362 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 7 domains and features, is associated with 112423 variant alleles and maps to 397 oligo probes.

Gene

This transcript is a product of gene ENSG00000156831.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000287437.3	NSMCE2-001	1195	247aa	ENSP00000287437.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6356	E5RFJ1 E5RHW9 E5RIM1 E5RK09 Q96MF7	NM_173685.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000522563.1	NSMCE2-007	1037	247aa	ENSP00000430668.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6356	E5RFJ1 E5RHW9 E5RIM1 E5RK09 Q96MF7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000517315.1	NSMCE2-009	996	187aa	ENSP00000428846.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFJ1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000517532.1	NSMCE2-004	841	193aa	ENSP00000429612.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RHW9 E5RIM1 E5RK09	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000523741.1	NSMCE2-003	787	139aa	ENSP00000429383.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RIM1 E5RK09	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000518013.1	NSMCE2-006	405	44aa	ENSP00000431002.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RK09	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000518146.1	NSMCE2-008	765	80aa	ENSP00000430313.1	Nonsense mediated decay		E5RG00 E5RK09	-	-
ENST00000519712.1	NSMCE2-011	664	94aa	ENSP00000429014.1	Nonsense mediated decay		H0YB96	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000521460.1	NSMCE2-014	645	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000519010.1	NSMCE2-013	848	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000520866.1	NSMCE2-002	759	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000523824.1	NSMCE2-010	592	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000523549.1	NSMCE2-012	549	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 6, Transcript length: 1,195 bps, Translation length: 247 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96MF7

CCDS

This transcript is a member of the Human CCDS set: CCDS6356

Version

ENST00000287437.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000381378 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000287437.3 NSMCE2-001

Summary