Transcript: ENST00000381213.3 MIER3-001

Description

mesoderm induction early response 1, family member 3 [Source:HGNC Symbol;Acc:26678]

Gene Synonyms

DKFZp686L09111, DKFZp781I1119, FLJ35954

Location

Chromosome 5: 56,215,430-56,247,952 reverse strand.

About this transcript

This transcript has 13 exons, is annotated with 13 domains and features, is associated with 13688 variant alleles and maps to 596 oligo probes.

Gene

This transcript is a product of gene ENSG00000155545.15 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000381226.3	MIER3-003	5210	555aa	ENSP00000370624.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8MQD4 Q7Z3K6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000381213.3	MIER3-001	5198	549aa	ENSP00000370611.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3973	A8MQD4 Q7Z3K6	NM_152622.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000381199.3	MIER3-004	5188	550aa	ENSP00000370596.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8MQD4 Q7Z3K6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409421.1	MIER3-005	2152	487aa	ENSP00000386584.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q7Z3K6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000336942.5	MIER3-008	601	145aa	ENSP00000337027.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8MQD4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000440000.1	MIER3-011	219	24aa	ENSP00000407169.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JXP7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000452157.1	MIER3-002	5240	119aa	ENSP00000408076.1	Nonsense mediated decay		Q7Z3K6	-	-
ENST00000451637.1	MIER3-007	304	44aa	ENSP00000400693.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000546593.1	MIER3-009	244	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000497185.2	MIER3-010	108	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480115.1	MIER3-006	394	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 5,198 bps, Translation length: 549 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q7Z3K6

CCDS

This transcript is a member of the Human CCDS set: CCDS3973

Version

ENST00000381213.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000132520 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000381213.3 MIER3-001

Summary