Transcript: ENST00000521671.1 ATP6V1C1-005

Description

ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1 [Source:HGNC Symbol;Acc:856]

Gene Synonyms

ATP6C, ATP6D, VATC, Vma5

Location

Chromosome 8: 104,063,345-104,075,498 forward strand.

About this transcript

This transcript has 6 exons, is associated with 4967 variant alleles and maps to 148 oligo probes.

Gene

This transcript is a product of gene ENSG00000155097.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000395862.3	ATP6V1C1-001	5612	382aa	ENSP00000379203.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6296	E7EV59 P21283	NM_001695.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518738.1	ATP6V1C1-004	2130	382aa	ENSP00000430282.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6296	E7EV59 P21283	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518857.1	ATP6V1C1-002	1501	307aa	ENSP00000428204.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EV59	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000521514.1	ATP6V1C1-003	1484	307aa	ENSP00000430129.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EV59	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518959.1	ATP6V1C1-006	553	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000521671.1	ATP6V1C1-005	517	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 517 bps,

Version

ENST00000521671.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000380104 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000521671.1 ATP6V1C1-005

Summary