Transcript: ENST00000284637.9 SH3RF1-001

Description

SH3 domain containing ring finger 1 [Source:HGNC Symbol;Acc:17650]

Gene Synonyms

KIAA1494, POSH, RNF142, SH3MD2

Location

About this transcript

This transcript has 12 exons, is annotated with 40 domains and features, is associated with 69565 variant alleles and maps to 766 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000284637.9	SH3RF1-001	5272	888aa	ENSP00000284637.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34099	D6RAL3 D6RHX5 Q7Z6J0	NM_020870.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000510806.1	SH3RF1-005	591	79aa	ENSP00000421714.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RAL3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000502315.1	SH3RF1-004	487	99aa	ENSP00000427585.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RAL3 D6RHX5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000511421.1	SH3RF1-002	1657	303aa	ENSP00000426418.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000508685.1	SH3RF1-003	2020	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 5,272 bps, Translation length: 888 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q7Z6J0

CCDS

This transcript is a member of the Human CCDS set: CCDS34099

Version

ENST00000284637.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000363382 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.